Survival-associated meQTLs across different cancer types


We identified 23,432 meQTLs associated with patient overall survival across different cancer types at FDR < 0.05.


e.g., "BLCA"
e.g., "rs11600543"


Cancer type
SNP ID
SNP position (hg19)
Alleles (A/a)
log-rank test p-value
Sample size
Median survival time AA
Median survival time Aa
Median survival time aa
Dispaly
KIRC rs76269659 chr21:44271947 C/A 1.4E-7 520 41.73 32.42 7.18 KM Plot
KIRC rs76271836 chr21:44263321 G/A 2.66E-7 516 41 31.77 7.18 KM Plot
KIRC rs7632297 chr3:48348163 A/C 3.23E-5 522 39.62 41.27 19.13 KM Plot
KIRC rs76414966 chr2:33068201 G/A 2.39E-7 516 39.62 42.47 5.4 KM Plot
KIRC rs7647817 chr3:48236507 G/A 6.21E-5 518 39.7 40.3 23.1 KM Plot
KIRC rs7652233 chr3:48358754 T/G 2.97E-5 525 39.53 41.27 19.13 KM Plot
KIRC rs7653152 chr3:48362097 G/C 3.05E-5 511 39.17 41.27 20.75 KM Plot
KIRC rs76548728 chr21:47826507 T/C 2.71E-5 519 38.88 46.9 6.87 KM Plot
KIRC rs76619563 chr21:47938271 G/A 1.3E-5 525 39.08 45.03 6.87 KM Plot
KIRC rs76709135 chr21:44342305 G/C 6.94E-10 514 42.47 33.07 7.18 KM Plot
KIRC rs76720668 chr21:47927114 G/A 1.51E-5 525 39.08 45.03 6.87 KM Plot
KIRC rs7672394 chr4:186353670 G/T 1.1E-6 516 3.53 40.63 38.97 KM Plot
KIRC rs7684509 chr4:186352136 T/C 1.2E-6 515 3.53 40 38.97 KM Plot
KIRC rs77038924 chr4:16199737 G/A 3.2E-6 527 38.95 46.8 8.22 KM Plot
KIRC rs77044321 chr3:48349314 C/T 3.09E-5 523 39.53 41.27 19.13 KM Plot